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1.
Mol Ecol ; 33(6): e17299, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38380534

RESUMO

Additive and dominance genetic variances underlying the expression of quantitative traits are important quantities for predicting short-term responses to selection, but they are notoriously challenging to estimate in most non-model wild populations. Specifically, large-sized or panmictic populations may be characterized by low variance in genetic relatedness among individuals which, in turn, can prevent accurate estimation of quantitative genetic parameters. We used estimates of genome-wide identity-by-descent (IBD) sharing from autosomal SNP loci to estimate quantitative genetic parameters for ecologically important traits in nine-spined sticklebacks (Pungitius pungitius) from a large, outbred population. Using empirical and simulated datasets, with varying sample sizes and pedigree complexity, we assessed the performance of different crossing schemes in estimating additive genetic variance and heritability for all traits. We found that low variance in relatedness characteristic of wild outbred populations with high migration rate can impair the estimation of quantitative genetic parameters and bias heritability estimates downwards. On the other hand, the use of a half-sib/full-sib design allowed precise estimation of genetic variance components and revealed significant additive variance and heritability for all measured traits, with negligible dominance contributions. Genome-partitioning and QTL mapping analyses revealed that most traits had a polygenic basis and were controlled by genes at multiple chromosomes. Furthermore, different QTL contributed to variation in the same traits in different populations suggesting heterogeneous underpinnings of parallel evolution at the phenotypic level. Our results provide important guidelines for future studies aimed at estimating adaptive potential in the wild, particularly for those conducted in outbred large-sized populations.


Assuntos
Genoma , Herança Multifatorial , Humanos , Genoma/genética , Mapeamento Cromossômico , Fenótipo , Modelos Genéticos , Polimorfismo de Nucleotídeo Único/genética
2.
PLoS Comput Biol ; 19(7): e1011268, 2023 07.
Artigo em Inglês | MEDLINE | ID: mdl-37498846

RESUMO

Permafrost thawing and the potential 'lab leak' of ancient microorganisms generate risks of biological invasions for today's ecological communities, including threats to human health via exposure to emergent pathogens. Whether and how such 'time-travelling' invaders could establish in modern communities is unclear, and existing data are too scarce to test hypotheses. To quantify the risks of time-travelling invasions, we isolated digital virus-like pathogens from the past records of coevolved artificial life communities and studied their simulated invasion into future states of the community. We then investigated how invasions affected diversity of the free-living bacteria-like organisms (i.e., hosts) in recipient communities compared to controls where no invasion occurred (and control invasions of contemporary pathogens). Invading pathogens could often survive and continue evolving, and in a few cases (3.1%) became exceptionally dominant in the invaded community. Even so, invaders often had negligible effects on the invaded community composition; however, in a few, highly unpredictable cases (1.1%), invaders precipitated either substantial losses (up to -32%) or gains (up to +12%) in the total richness of free-living species compared to controls. Given the sheer abundance of ancient microorganisms regularly released into modern communities, such a low probability of outbreak events still presents substantial risks. Our findings therefore suggest that unpredictable threats so far confined to science fiction and conjecture could in fact be powerful drivers of ecological change.


Assuntos
Biota , Espécies Introduzidas , Humanos , Ecossistema
3.
Am Nat ; 200(1): E16-E35, 2022 07.
Artigo em Inglês | MEDLINE | ID: mdl-35737989

RESUMO

AbstractUnderstanding how a species' life history affects its capacity to cope with environmental changes is important in the context of rapid climate changes. Reinterpreting previous results from a well-developed theoretical framework, we show that a trade-off exists between a species' ability to genetically adapt to long-term gradual environmental changes and its ability to demographically resist short-term environmental perturbations, causing variation in its vital rates. Surprisingly, this important insight has not been made formally explicit before. Choosing archetypal life histories along the fast-slow pace-of-life continuum and modeling their eco-evolutionary dynamics, we further show that long-lived species have larger demographic robustness to interannual fluctuations but limited trait evolutionary responses in gradually changing environments. In contrast, short-lived species had larger evolvability but reduced demographic robustness. This trade-off bears heavily on extinction probabilities of populations tracking fast trait changes in stochastic environments. Faster trait evolution in short-lived species came at the expense of their higher sensitivity to short-term fluctuations, causing higher extinction rates than for long-lived species. Long-lived species persisted better on short timescales but built maladaptation and an extinction debt over time. This work shows how modeling species' eco-evolutionary dynamics can help to assess species vulnerability to environmental changes.


Assuntos
Adaptação Fisiológica , Mudança Climática , Evolução Biológica , Fenótipo
4.
Genetics ; 220(1)2022 01 04.
Artigo em Inglês | MEDLINE | ID: mdl-34864966

RESUMO

Both pleiotropic connectivity and mutational correlations can restrict the decoupling of traits under divergent selection, but it is unknown which is more important in trait evolution. To address this question, we create a model that permits within-population variation in both pleiotropic connectivity and mutational correlation, and compare their relative importance to trait evolution. Specifically, we developed an individual-based stochastic model where mutations can affect whether a locus affects a trait and the extent of mutational correlations in a population. We find that traits can decouple whether there is evolution in pleiotropic connectivity or mutational correlation, but when both can evolve, then evolution in pleiotropic connectivity is more likely to allow for decoupling to occur. The most common genotype found in this case is characterized by having one locus that maintains connectivity to all traits and another that loses connectivity to the traits under stabilizing selection (subfunctionalization). This genotype is favored because it allows the subfunctionalized locus to accumulate greater effect size alleles, contributing to increasingly divergent trait values in the traits under divergent selection without changing the trait values of the other traits (genetic modularization). These results provide evidence that partial subfunctionalization of pleiotropic loci may be a common mechanism of trait decoupling under regimes of corridor selection.


Assuntos
Fenótipo
5.
Genetics ; 219(4)2021 12 10.
Artigo em Inglês | MEDLINE | ID: mdl-34849850

RESUMO

Genetic correlations between traits may cause correlated responses to selection. Previous models described the conditions under which genetic correlations are expected to be maintained. Selection, mutation, and migration are all proposed to affect genetic correlations, regardless of whether the underlying genetic architecture consists of pleiotropic or tightly linked loci affecting the traits. Here, we investigate the conditions under which pleiotropy and linkage have different effects on the genetic correlations between traits by explicitly modeling multiple genetic architectures to look at the effects of selection strength, degree of correlational selection, mutation rate, mutational variance, recombination rate, and migration rate. We show that at mutation-selection(-migration) balance, mutation rates differentially affect the equilibrium levels of genetic correlation when architectures are composed of pairs of physically linked loci compared to architectures of pleiotropic loci. Even when there is perfect linkage (no recombination within pairs of linked loci), a lower genetic correlation is maintained than with pleiotropy, with a lower mutation rate leading to a larger decrease. These results imply that the detection of causal loci in multitrait association studies will be affected by the type of underlying architectures, whereby pleiotropic variants are more likely to be underlying multiple detected associations. We also confirm that tighter linkage between nonpleiotropic causal loci maintains higher genetic correlations at the traits and leads to a greater proportion of false positives in association analyses.


Assuntos
Ligação Genética , Pleiotropia Genética , Locos de Características Quantitativas , Animais , Bactérias , Mapeamento Cromossômico , Simulação por Computador , Estudo de Associação Genômica Ampla , Humanos , Modelos Genéticos , Mutação , Taxa de Mutação , Plantas , Polimorfismo de Nucleotídeo Único , Recombinação Genética , Seleção Genética
6.
Mol Ecol Resour ; 21(7): 2350-2363, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34097819

RESUMO

Identifying local adaptation in bottlenecked species is essential for conservation management. Selection detection methods have an important role in species management plans, assessments of adaptive capacity, and looking for responses to climate change. Yet, the allele frequency changes exploited in selection detection methods are similar to those caused by the strong neutral genetic drift expected during a bottleneck. Consequently, it is often unclear what accuracy selection detection methods have across bottlenecked populations. In this study, simulations were used to explore if signals of selection could be confidently distinguished from genetic drift across 23 bottlenecked and reintroduced populations of Alpine ibex (Capra ibex). The meticulously recorded demographic history of the Alpine ibex was used to generate comprehensive simulated SNP data. The simulated SNPs were then used to benchmark the confidence we could place in outliers identified in empirical Alpine ibex RADseq derived SNP data. Within the simulated data set, the false positive rates were high for all selection detection methods (FST outlier scans and Genetic-Environment Association analyses) but fell substantially when two or more methods were combined. True positive rates were consistently low and became negligible with increased stringency. Despite finding many outlier loci in the empirical Alpine ibex SNPs, none could be distinguished from genetic drift-driven false positives. Unfortunately, the low true positive rate also prevents the exclusion of recent local adaptation within the Alpine ibex. The baselines and stringent approach outlined here should be applied to other bottlenecked species to ensure the risk of false positive, or negative, signals of selection are accounted for in conservation management plans.


Assuntos
Deriva Genética , Genética Populacional , Animais , Frequência do Gene , Cabras
7.
Sci Total Environ ; 779: 146393, 2021 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-34030256

RESUMO

Warmer climate and more frequent extreme droughts will pose major threats to forest ecosystems. Past demography processes due to post-glacial recolonization and adaptation to local environmental conditions are among the main contributors to genetic differentiation processes among provenances. Assessing the intra-specific variability of tree growth responses to such changes is crucial to explore a species' potential to cope with climate warming. We combined growth-related traits derived from tree-ring width series with neutral genetic information of 18 European provenances of silver fir (Abies alba Mill.) growing in two common garden experiments in Switzerland. Analyses based on neutral single nucleotide polymorphisms revealed that the studied provenances grouped into three longitudinal clusters. These three genetic clusters showed differences in growth traits (height and DBH), with the provenances from the eastern cluster exhibiting the highest growth. The Pyrenees cluster showed significantly lower recovery and resilience to the extreme drought of 2003 as well as lower values of growth autocorrelation. QST-FST and correlation analyses with climate of provenance origin suggest that the differences among provenances found in some traits result from natural selection. Our study suggests that the last post-glacial re-colonization and natural selection are the major drivers explaining the intra-specific variability in growth of silver fir across Europe. These findings highlight the importance of combining dendroecology and genetic analyses on fitness-related traits to assess the potential of a species to cope with global environmental change and provide insights to support assisted gene flow to ensure the persistence of the species in European forests.


Assuntos
Mudança Climática , Ecossistema , Secas , Europa (Continente) , Seleção Genética , Suíça
8.
Glob Chang Biol ; 27(6): 1181-1195, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-33345407

RESUMO

The ongoing increase in global temperature affects biodiversity, especially in mountain regions where climate change is exacerbated. As sessile, long-lived organisms, trees are especially challenged in terms of adapting to rapid climate change. Here, we show that low rates of allele frequency shifts in Swiss stone pine (Pinus cembra) occurring near the treeline result in high genomic vulnerability to future climate warming, presumably due to the species' long generation time. Using exome sequencing data from adult and juvenile cohorts in the Swiss Alps, we found an average rate of allele frequency shift of 1.23 × 10-2 /generation (i.e. 40 years) at presumably neutral loci, with similar rates for putatively adaptive loci associated with temperature (0.96 × 10-2 /generation) and precipitation (0.91 × 10-2 /generation). These recent shifts were corroborated by forward-in-time simulations at neutral and adaptive loci. Additionally, in juvenile trees at the colonisation front we detected alleles putatively beneficial under a future warmer and drier climate. Notably, the observed past rate of allele frequency shift in temperature-associated loci was decidedly lower than the estimated average rate of 6.29 × 10-2 /generation needed to match a moderate future climate scenario (RCP4.5). Our findings suggest that species with long generation times may have difficulty keeping up with the rapid climate change occurring in high mountain areas and thus are prone to local extinction in their current main elevation range.


Assuntos
Pinus , Árvores , Biodiversidade , Mudança Climática , Genômica , Árvores/genética
9.
Evolution ; 74(12): 2725-2740, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-33135158

RESUMO

The additive genetic variation (VA ) of fitness in a population is of particular importance to quantify its adaptive potential and predict its response to rapid environmental change. Recent statistical advances in quantitative genetics and the use of new molecular tools have fostered great interest in estimating fitness VA in wild populations. However, the value of VA for fitness in predicting evolutionary changes over several generations remains mostly unknown. In our study, we addressed this question by combining classical quantitative genetics with experimental evolution in the model organism Tribolium castaneum (red flour beetle) in three new environmental conditions (Dry, Hot, Hot-Dry). We tested for potential constraints that might limit adaptation, including environmental and sex genetic antagonisms captured by negative genetic covariance between environments and female and male fitness, respectively. Observed fitness changes after 20 generations mainly matched our predictions. Given that body size is commonly used as a proxy for fitness, we also tested how this trait and its genetic variance (including nonadditive genetic variance) were impacted by environmental stress. In both traits, genetic variances were sex and condition dependent, but they differed in their variance composition, cross-sex and cross-environment genetic covariances, as well as in the environmental impact on VA .


Assuntos
Adaptação Biológica , Evolução Biológica , Aptidão Genética , Tribolium , Animais , Tamanho Corporal , Feminino , Interação Gene-Ambiente , Masculino , Caracteres Sexuais , Estresse Fisiológico
10.
BMC Evol Biol ; 20(1): 127, 2020 09 24.
Artigo em Inglês | MEDLINE | ID: mdl-32972368

RESUMO

BACKGROUND: Angiosperms employ an astonishing variety of visual and olfactory floral signals that are generally thought to evolve under natural selection. Those morphological and chemical traits can form highly correlated sets of traits. It is not always clear which of these are used by pollinators as primary targets of selection and which would be indirectly selected by being linked to those primary targets. Quantitative genetics tools for predicting multiple traits response to selection have been developed since long and have advanced our understanding of evolution of genetically correlated traits in various biological systems. We use these tools to predict the evolutionary trajectories of floral traits and understand the selection pressures acting on them. RESULTS: We used data from an artificial selection and a pollinator (bumblebee, hoverfly) evolution experiment with fast cycling Brassica rapa plants to predict evolutionary changes of 12 floral volatiles and 4 morphological floral traits in response to selection. Using the observed selection gradients and the genetic variance-covariance matrix (G-matrix) of the traits, we showed that the observed responses of most floral traits including volatiles were predicted in the right direction in both artificial- and bumblebee-selection experiment. Genetic covariance had a mix of constraining and facilitating effects on evolutionary responses. We further revealed that G-matrices also evolved in the selection processes. CONCLUSIONS: Overall, our integrative study shows that floral signals, especially volatiles, evolve under selection in a mostly predictable way, at least during short term evolution. Evolutionary constraints stemming from genetic covariance affected traits evolutionary trajectories and thus it is important to include genetic covariance for predicting the evolutionary changes of a comprehensive suite of traits. Other processes such as resource limitation and selfing also need to be considered for a better understanding of floral trait evolution.


Assuntos
Brassica rapa , Flores/genética , Polinização , Seleção Genética , Animais , Abelhas , Brassica rapa/genética , Dípteros , Fenótipo
11.
Mol Ecol ; 29(20): 3938-3953, 2020 10.
Artigo em Inglês | MEDLINE | ID: mdl-32844494

RESUMO

Plasticity and evolution are two processes allowing populations to respond to environmental changes, but how both are related and impact each other remains controversial. We studied plastic and evolutionary responses in gene expression of Tribolium castaneum after exposure of the beetles to new environments that differed from ancestral conditions in temperature, humidity or both. Using experimental evolution with 10 replicated lines per condition, we were able to demonstrate adaptation after 20 generations. We measured whole-transcriptome gene expression with RNA-sequencing to infer evolutionary and plastic changes. We found more evidence for changes in mean expression (shift in the intercept of reaction norms) in adapted lines than for changes in plasticity (shifts in slopes). Plasticity was mainly preserved in selected lines and was responsible for a large part of the phenotypic divergence in expression between ancestral and new conditions. However, we found that genes with the largest evolutionary changes in expression also evolved reduced plasticity and often showed expression levels closer to the ancestral stage. Results obtained in the three different conditions were similar, suggesting that restoration of ancestral expression levels during adaptation is a general evolutionary pattern. With a larger sample in the most stressful condition, we were able to detect a positive correlation between the proportion of genes with reversion of the ancestral plastic response and mean fitness per selection line.


Assuntos
Tribolium , Aclimatação , Adaptação Fisiológica/genética , Animais , Evolução Biológica , Fenótipo , Transcriptoma/genética , Tribolium/genética
12.
PLoS Genet ; 16(5): e1008768, 2020 05.
Artigo em Inglês | MEDLINE | ID: mdl-32379753

RESUMO

Gene expression is known to be highly responsive to the environment and important for adjustment of metabolism but there is also growing evidence that differences in gene regulation contribute to species divergence and differences among locally adapted populations. However, most studies so far investigated populations when divergence had already occurred. Selection acting on expression levels at the onset of adaptation to an environmental change has not been characterized. Understanding the mechanisms is further complicated by the fact that environmental change is often multivariate, meaning that organisms are exposed to multiple stressors simultaneously with potentially interactive effects. Here we use a novel approach by combining fitness and whole-transcriptome data in a large-scale experiment to investigate responses to drought, heat and their combination in Tribolium castaneum. We found that fitness was reduced by both stressors and their combined effect was almost additive. Expression data showed that stressor responses were acting independently and did not interfere physiologically. Since we measured expression and fitness within the same individuals, we were able to estimate selection on gene expression levels. We found that variation in fitness can be attributed to gene expression variation and that selection pressures were environment dependent and opposite between control and stress conditions. We could further show that plastic responses of expression were largely adaptive, i.e. in the direction that should increase fitness.


Assuntos
Perfilação da Expressão Gênica/métodos , Proteínas de Insetos/genética , Estresse Fisiológico , Tribolium/fisiologia , Animais , Secas , Feminino , Regulação da Expressão Gênica , Aptidão Genética , Masculino , Análise de Sequência de RNA , Termotolerância , Tribolium/genética
13.
Evol Lett ; 4(1): 4-18, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-32055407

RESUMO

Global climate change (GCC) increasingly threatens biodiversity through the loss of species, and the transformation of entire ecosystems. Many species are challenged by the pace of GCC because they might not be able to respond fast enough to changing biotic and abiotic conditions. Species can respond either by shifting their range, or by persisting in their local habitat. If populations persist, they can tolerate climatic changes through phenotypic plasticity, or genetically adapt to changing conditions depending on their genetic variability and census population size to allow for de novo mutations. Otherwise, populations will experience demographic collapses and species may go extinct. Current approaches to predicting species responses to GCC begin to combine ecological and evolutionary information for species distribution modelling. Including an evolutionary dimension will substantially improve species distribution projections which have not accounted for key processes such as dispersal, adaptive genetic change, demography, or species interactions. However, eco-evolutionary models require new data and methods for the estimation of a species' adaptive potential, which have so far only been available for a small number of model species. To represent global biodiversity, we need to devise large-scale data collection strategies to define the ecology and evolutionary potential of a broad range of species, especially of keystone species of ecosystems. We also need standardized and replicable modelling approaches that integrate these new data to account for eco-evolutionary processes when predicting the impact of GCC on species' survival. Here, we discuss different genomic approaches that can be used to investigate and predict species responses to GCC. This can serve as guidance for researchers looking for the appropriate experimental setup for their particular system. We furthermore highlight future directions for moving forward in the field and allocating available resources more effectively, to implement mitigation measures before species go extinct and ecosystems lose important functions.

14.
Nat Commun ; 11(1): 1001, 2020 02 21.
Artigo em Inglês | MEDLINE | ID: mdl-32081890

RESUMO

Human activity has caused dramatic population declines in many wild species. The resulting bottlenecks have a profound impact on the genetic makeup of a species with unknown consequences for health. A key genetic factor for species survival is the evolution of deleterious mutation load, but how bottleneck strength and mutation load interact lacks empirical evidence. We analyze 60 complete genomes of six ibex species and the domestic goat. We show that historic bottlenecks rather than the current conservation status predict levels of genome-wide variation. By analyzing the exceptionally well-characterized population bottlenecks of the once nearly extinct Alpine ibex, we find genomic evidence of concurrent purging of highly deleterious mutations but accumulation of mildly deleterious mutations. This suggests that recolonization bottlenecks induced both relaxed selection and purging, thus reshaping the landscape of deleterious mutation load. Our findings highlight that even populations of ~1000 individuals can accumulate mildly deleterious mutations. Conservation efforts should focus on preventing population declines below such levels to ensure long-term survival of species.


Assuntos
Cabras/genética , Mutação , Animais , Animais Selvagens/classificação , Animais Selvagens/genética , Simulação por Computador , Conservação dos Recursos Naturais , Evolução Molecular , Variação Genética , Genética Populacional , Genoma , Cabras/classificação , Modelos Genéticos , Especificidade da Espécie , Tundra
15.
Am Nat ; 193(6): 798-813, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-31094605

RESUMO

While clines in environmental tolerance and phenotypic plasticity along a single species' range have been reported repeatedly and are of special interest in the context of adaptation to environmental changes, we know little about their evolution. Recent empirical findings in ectotherms suggest that processes underlying dynamic species' ranges can give rise to spatial differences in environmental tolerance and phenotypic plasticity within species. We used individual-based simulations to investigate how plasticity and tolerance evolve in the course of three scenarios of species' range shifts and range expansions on environmental gradients. We found that regions of a species' range that experienced a longer history or larger extent of environmental change generally exhibited increased plasticity or tolerance. Such regions may be at the trailing edge when a species is tracking its ecological niche in space (e.g., in a climate change scenario) or at the front edge when a species expands into a new habitat (e.g., in an expansion/invasion scenario). Elevated tolerance and plasticity in the distribution center was detected when asymmetric environmental change (e.g., polar amplification) led to a range expansion. However, tolerance and plasticity clines were transient and slowly flattened out after range dynamics because of genetic assimilation.


Assuntos
Adaptação Fisiológica , Evolução Biológica , Ecossistema , Modelos Genéticos , Animais , Mudança Climática , Dinâmica Populacional , Análise Espacial
16.
Am Nat ; 193(5): 633-644, 2019 05.
Artigo em Inglês | MEDLINE | ID: mdl-31002565

RESUMO

Predicting population responses to environmental change is an ongoing challenge in ecology. Studies investigating the links between fitness-related phenotypic traits and demography have shown that trait dynamic responses to environmental change can sometimes precede population dynamic responses and thus can be used as an early warning signal. However, it is still unknown under which ecological and evolutionary circumstances shifts in fitness-related traits can precede population responses to environmental perturbation. Here, we take a trait-based demographic approach and investigate both trait and population dynamics in a density-regulated population in response to a gradual change in the environment. We explore the ecological and evolutionary constraints under which shifts in fitness-related traits precede a decline in population size. We show both analytically and with experimental data that under medium to slow rates of environmental change, shifts in a trait value can precede population decline. We further show the positive influence of environmental predictability, net reproductive rate, plasticity, and genetic variation on shifts in trait dynamics preceding potential population declines. These results still hold under nonconstant genetic variation and environmental stochasticity. Our study highlights ecological and evolutionary circumstances under which a fitness-related trait can be used as an early warning signal of an impending population decline.


Assuntos
Evolução Biológica , Demografia , Aptidão Genética , Modelos Biológicos , Característica Quantitativa Herdável
17.
Evolution ; 2018 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-29911337

RESUMO

Geographic clines offer insights about putative targets and agents of natural selection as well as tempo and mode of adaptation. However, demographic processes can lead to clines that are indistinguishable from adaptive divergence. Using the widespread yellow dung fly Scathophaga stercoraria (Diptera: Scathophagidae), we examine quantitative genetic differentiation (QST ) of wing shape across North America, Europe, and Japan, and compare this differentiation with that of ten microsatellites (FST ). Morphometric analyses of 28 populations reared at three temperatures revealed significant thermal plasticity, sexual dimorphism, and geographic differentiation in wing shape. In North America morphological differentiation followed the decline in microsatellite variability along the presumed route of recent colonization from the southeast to the northwest. Across Europe, where S. stercoraria presumably existed for much longer time and where no molecular pattern of isolation by distance was evident, clinal variation was less pronounced despite significant morphological differentiation (QST >FST ). Shape vector comparisons further indicate that thermal plasticity (hot-to-cold) does not mirror patterns of latitudinal divergence (south-to-north), as might have been expected under a scenario with temperature as the major agent of selection. Our findings illustrate the importance of detailed phylogeographic information when interpreting geographic clines of dispersal traits in an adaptive evolutionary framework.

18.
J Crit Care ; 47: 21-29, 2018 10.
Artigo em Inglês | MEDLINE | ID: mdl-29886063

RESUMO

BACKGROUND: Variability exists between ICUs in the limitations of therapy. Moreover practices may evolve over time. This single-center observational study aimed to compare withholding or withdrawing practices between 2012 and 2016. METHODS: For each period and patient concerned by limitations, withholding "do-not start", withholding "do-not-increase" and withdrawal measures were recorded. RESULTS: At a four-year interval, the rate of patients undergoing withholding or withdrawal rose from 10 to 23% and 4 to 7%, respectively. The proportion of patients dying in the ICU with previous limitations increased (53 to 89%), as did patients discharged alive despite withholding instructions (12 to 36%). The overall mortality (28%) was stable over time as the rate of failed resuscitation attempt declined (47 to 11%). In 2016 vs 2012, limitations started earlier following admission: 1 vs 7 days for withholding" do-not-start", 4 vs 8 for withholding "do-not-increase", 4 vs 7 for withdrawal. Notwithstanding the outcome and limitations applied, the median length of ICU stay of patients involved dropped from 13 days in 2012 to 8 days in 2016. CONCLUSION: A timely inclination to forego hopeless treatments resulted in a lower rate of failed resuscitations before death without change in global mortality.


Assuntos
Estado Terminal/mortalidade , Tomada de Decisões , Tempo de Internação , Avaliação de Resultados em Cuidados de Saúde , Ressuscitação , Suspensão de Tratamento/estatística & dados numéricos , Idoso , Idoso de 80 Anos ou mais , Feminino , França , Mortalidade Hospitalar , Humanos , Unidades de Terapia Intensiva , Masculino , Pessoa de Meia-Idade , Estudos Prospectivos
19.
Mol Ecol ; 27(3): 606-612, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-29385652

RESUMO

Over the last decade, the genomic revolution has offered the possibility to generate tremendous amounts of data that contain valuable information on the genetic basis of phenotypic traits, such as those linked to human diseases or those that allow for species to adapt to a changing environment. Most ecologically relevant traits are controlled by a large number of genes with small individual effects on trait variation, but that are connected with one another through complex developmental, metabolic and biochemical networks. As a result, it has recently been suggested that most adaptation events in natural populations are reached via correlated changes at multiple genes at a time, for which the name polygenic adaptation has been coined. The current challenge is to develop methods to extract the relevant information from genomic data to detect the signature of polygenic evolutionary change. The symposium entitled "Detecting the Genomic Signal of Polygenic Adaptation and the Role of Epistasis in Evolution" held in 2017 at the University of Zürich aimed at reviewing our current state of knowledge. In this review, we use the talks of the invited speakers to summarize some of the most recent developments in this field.


Assuntos
Adaptação Fisiológica/genética , Evolução Biológica , Epistasia Genética , Genoma , Herança Multifatorial/genética , Animais , Congressos como Assunto , Humanos , Seleção Genética
20.
Biol Rev Camb Philos Soc ; 93(1): 574-599, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-28776950

RESUMO

Dispersal is a process of central importance for the ecological and evolutionary dynamics of populations and communities, because of its diverse consequences for gene flow and demography. It is subject to evolutionary change, which begs the question, what is the genetic basis of this potentially complex trait? To address this question, we (i) review the empirical literature on the genetic basis of dispersal, (ii) explore how theoretical investigations of the evolution of dispersal have represented the genetics of dispersal, and (iii) discuss how the genetic basis of dispersal influences theoretical predictions of the evolution of dispersal and potential consequences. Dispersal has a detectable genetic basis in many organisms, from bacteria to plants and animals. Generally, there is evidence for significant genetic variation for dispersal or dispersal-related phenotypes or evidence for the micro-evolution of dispersal in natural populations. Dispersal is typically the outcome of several interacting traits, and this complexity is reflected in its genetic architecture: while some genes of moderate to large effect can influence certain aspects of dispersal, dispersal traits are typically polygenic. Correlations among dispersal traits as well as between dispersal traits and other traits under selection are common, and the genetic basis of dispersal can be highly environment-dependent. By contrast, models have historically considered a highly simplified genetic architecture of dispersal. It is only recently that models have started to consider multiple loci influencing dispersal, as well as non-additive effects such as dominance and epistasis, showing that the genetic basis of dispersal can influence evolutionary rates and outcomes, especially under non-equilibrium conditions. For example, the number of loci controlling dispersal can influence projected rates of dispersal evolution during range shifts and corresponding demographic impacts. Incorporating more realism in the genetic architecture of dispersal is thus necessary to enable models to move beyond the purely theoretical towards making more useful predictions of evolutionary and ecological dynamics under current and future environmental conditions. To inform these advances, empirical studies need to answer outstanding questions concerning whether specific genes underlie dispersal variation, the genetic architecture of context-dependent dispersal phenotypes and behaviours, and correlations among dispersal and other traits.


Assuntos
Distribuição Animal/fisiologia , Migração Animal , Evolução Biológica , Variação Genética , Animais
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